Pubchase recommended papers to read system pretty good ...

Been playing around with Pubchase for various reasons and I have discovered that their system for recommending papers to read is quite good.  What I first did was try to upload my reference collection to Pubchase (I think it did not quite finish but most of the papers I have in my collections got in there).  And then I played around with Pubchase a bit.  And I got busy as usual.  And then I was pleasantly surprised to get an email with recommended papers to read / add to my collection.

Below I have posted the list from the latest email.  The recommendations are spot on.  The links take you to a Pubchase page for each paper and if you have an account there you can add them to ones collection or go directly to the paper.  Definitely worth checking out ..

Bacillus pervagus sp. nov. and Bacillus andreesenii sp. nov., isolated from a composting reactor. Jan 10, 2014 International Journal Of Systematic And Evolutionary Microbiology Kosowski K, Schmidt M, Pukall R, Hause G, Kämpfer P, Lechner U Streptophyte algae and the origin of land plants revisited using heterogeneous models with three new algal chloroplast genomes. Jan 06, 2014 Molecular Biology And Evolution Zhong B, Xi Z, Goremykin VV, Fong R, McLenachan PA, Novis PM, Davis CC, Penny D Isolation, taxonomy and phylogeny of hyperthermophilic microorganisms. Jan 13, 2014 World Journal Of Microbiology & Biotechnology Blöchl E, Burggraf S, Fiala G, Lauerer G, Huber G, Huber R, Rachel R, Segerer A, Stetter KO, Völkl P The family name Solimonadaceae Losey et al. 2013 is illegitimate, proposals to create the names 'Sinobacter soli' comb. nov. and 'Sinobacter variicoloris' contravene the Code, the family name Xanthomonadaceae Saddler and Bradbury 2005 and the order name Xanthomonadales Saddler and Bradbury 2005 are illegitimate and notes on the application of the family names Solibacteraceae Zhou et al. 2008, Nevskiaceae Henrici and Johnson 1935 (Approved Lists 1980) and Lysobacteraceae Christensen and Cook 1978 (Approved Lists 1980) and order name Lysobacteriales Christensen and Cook 1978 (Approved Lists 1980) with respect to the classification of the corresponding type genera Solibacter Zhou et al. 2008, Nevskia Famintzin 1892 (Approved Lists 1980) and Lysobacter Christensen and Cook 1978 (Approved Lists 1980) and importance of accurately expressing the link between a taxonomic name, its authors and the corresponding description/circumscription/emendation. Jan 10, 2014 International Journal Of Systematic And Evolutionary Microbiology Tindall BJ The correct name of the taxon that contains the type strain of Rhodococcus equi. Jan 10, 2014 International Journal Of Systematic And Evolutionary Microbiology Tindall BJ Formosa arctica sp. nov., isolated from Arctic seawater. Jan 10, 2014 International Journal Of Systematic And Evolutionary Microbiology Kwon T, Baek K, Lee K, Kang I, Cho JC Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Jan 17, 2014 GigaScience Bradnam KR, Fass JN, Alexandrov A, Baranay P, Bechner M, Birol I, Boisvert S, Chapman JA, Chapuis G, Chikhi R, Chitsaz H, Chou WC, Corbeil J, Del Fabbro C, Docking TR, Durbin R, Earl D, Emrich S, Fedotov P, Fonseca NA, Ganapathy G, Gibbs RA, Gnerre S, Godzaridis E, Goldstein S, Haimel M, Hall G, Haussler D, Hiatt JB, Ho IY, Howard J, Hunt M, Jackman SD, Jaffe DB, Jarvis ED, Jiang H, Kazakov S, Kersey PJ, Kitzman JO, Knight JR, Koren S, Lam TW, Lavenier D, Laviolette F, Li Y, Li Z, Liu B, Liu Y, Luo R, Maccallum I, Macmanes MD, Maillet N, Melnikov S, Naquin D, Ning Z, Otto TD, Paten B, Paulo OS, Phillippy AM, Pina-Martins F, Place M, Przybylski D, Qin X, Qu C, Ribeiro FJ, Richards S, Rokhsar DS, Ruby JG, Scalabrin S, Schatz MC, Schwartz DC, Sergushichev A, Sharpe T, Shaw TI, Shendure J, Shi Y, Simpson JT, Song H, Tsarev F, Vezzi F, Vicedomini R, Vieira BM, Wang J, Worley KC, Yin S, Yiu SM, Yuan J, Zhang G, Zhang H, Zhou S, Korf IF Sequencing depth and coverage: key considerations in genomic analyses. Jan 17, 2014 Nature Reviews. Genetics Sims D, Sudbery I, Ilott NE, Heger A, Ponting CP Halomonas olivaria sp. nov., a moderately halophilic bacterium isolated from olive-processing effluents. Jan 10, 2014 International Journal Of Systematic And Evolutionary Microbiology Amouric A, Liebgott PP, Joseph M, Brochier-Armanet C, Lorquin J Genome-wide Profiling of Genetic Synthetic Lethality Identifies CDK12 as a Novel Determinant of PARP1/2 Inhibitor Sensitivity. Jan 07, 2014 Cancer Research Bajrami I, Frankum JR, Konde A, Miller RE, Rehman FL, Brough R, Campbell J, Sims D, Rafiq R, Hooper S, Chen L, Kozarewa I, Assiotis I, Fenwick K, Natrajan R, Lord CJ, Ashworth A Networks of lexical borrowing and lateral gene transfer in language and genome evolution. Jan 15, 2014 BioEssays : News And Reviews In Molecular, Cellular And Developmental Biology List JM, Nelson-Sathi S, Geisler H, Martin W Mathematical modeling of primary succession of murine intestinal microbiota. Jan 08, 2014 Proceedings Of The National Academy Of Sciences Of The United States Of America Marino S, Baxter NT, Huffnagle GB, Petrosino JF, Schloss PD Interactions in the microbiome: communities of organisms and communities of genes. Jan 06, 2014 FEMS Microbiology Reviews Boon E, Meehan CJ, Whidden C, Wong DH, Langille MG, Beiko RG Cultivation and preservation of members of the family Halobacteriaceae. Jan 15, 2014 World Journal Of Microbiology & Biotechnology Tindall BJ Phosphorus flame retardants in indoor dust and their relation to asthma and allergies of inhabitants. Jan 10, 2014 Indoor Air Araki A, Saito I, Kanazawa A, Morimoto K, Nakayama K, Shibata E, Tanaka M, Takigawa T, Yoshimura T, Chikara H, Saijo Y, Kishi R A genetic inventory of spacecraft and associated surfaces. Jan 17, 2014 Astrobiology La Duc MT, Venkateswaran K, Conley CA Muc5b is required for airway defence. Jan 16, 2014 Nature Roy MG, Livraghi-Butrico A, Fletcher AA, McElwee MM, Evans SE, Boerner RM, Alexander SN, Bellinghausen LK, Song AS, Petrova YM, Tuvim MJ, Adachi R, Romo I, Bordt AS, Bowden MG, Sisson JH, Woodruff PG, Thornton DJ, Rousseau K, De la Garza MM, Moghaddam SJ, Karmouty-Quintana H, Blackburn MR, Drouin SM, Davis CW, Terrell KA, Grubb BR, O'Neal WK, Flores SC, Cota-Gomez A, Lozupone CA, Donnelly JM, Watson AM, Hennessy CE, Keith RC, Yang IV, Barthel L, Henson PM, Janssen WJ, Schwartz DA, Boucher RC, Dickey BF, Evans CM Comparative genomics and functional analysis of rhamnose catabolic pathways and regulons in bacteria. Jan 06, 2014 Frontiers In Microbiology Rodionova IA, Li X, Thiel V, Stolyar S, Stanton K, Fredrickson JK, Bryant DA, Osterman AL, Best AA, Rodionov DA From Genus to Phylum: Large-Subunit and Internal Transcribed Spacer rRNA Operon Regions Show Similar Classification Accuracies Influenced by Database Composition. Jan 17, 2014 Applied And Environmental Microbiology Porras-Alfaro A, Liu KL, Kuske CR, Xie G Annotated genes and nonannotated genomes: cross-species use of Gene Ontology in ecology and evolution research. Jan 17, 2014 Molecular Ecology Primmer CR, Papakostas S, Leder EH, Davis MJ, Ragan MA Deposition of Extreme-Tolerant Bacterial Strains Isolated during Different Phases of Phoenix Spacecraft Assembly in a Public Culture Collection. Jan 17, 2014 Astrobiology Venkateswaran K, Vaishampayan P, Benardini JN, Rooney AP, Spry JA The Pine Bark Adelgid, Pineus strobi, Contains Two Novel Bacteriocyte-Associated Gammaproteobacterial Symbionts. Jan 17, 2014 Applied And Environmental Microbiology Toenshoff ER, Szabó G, Gruber D, Horn M First detection of Toscana virus in Corsica, France. Jan 15, 2014 Clinical Microbiology And Infection : The Official Publication Of The European Society Of Clinical Microbiology And Infectious Diseases Bichaud L, Izri A, de Lamballerie X, Moureau G, Charrel RN Clinical and epidemiologic phenotypes of childhood asthma. Jan 16, 2014 American Journal Of Respiratory And Critical Care Medicine Depner M, Fuchs O, Genuneit J, Karvonen AM, Hyvärinen A, Kaulek V, Roduit C, Weber J, Schaub B, Lauener R, Kabesch M, Pfefferle PI, Frey U, Pekkanen J, Dalphin JC, Riedler J, Braun-Fahrländer C, von Mutius E, Ege MJ, PASTURE Study Group Open Science and Reporting Animal Studies: Who's Accountable? Jan 10, 2014 PLoS Biology Eisen JA, Ganley E, Maccallum CJ HPC-CLUST: distributed hierarchical clustering for large sets of nucleotide sequences. Jan 16, 2014 Bioinformatics (Oxford, England) Matias Rodrigues JF, von Mering C Early life microbial exposure and fractional exhaled nitric oxide in school-age children: a prospective birth cohort study. Jan 08, 2014 Environmental Health : A Global Access Science Source Casas L, Tischer C, Wouters IM, Torrent M, Gehring U, Garcia-Esteban R, Thiering E, Postma DS, de Jongste J, Smit HA, Borràs-Santos A, Zock JP, Hyvärinen A, Heinrich J, Sunyer J Fragment assignment in the cloud with eXpress-D. Jan 07, 2014 BMC Bioinformatics Roberts A, Feng H, Pachter L Implementing planetary protection measures on the Mars science laboratory. Jan 17, 2014 Astrobiology Benardini JN, La Duc MT, Beaudet RA, Koukol R Implementing planetary protection on the atlas v fairing and ground systems used to launch the Mars science laboratory. Jan 17, 2014 Astrobiology Benardini JN, La Duc MT, Ballou D, Koukol R Bacterial vesicles in marine ecosystems. Jan 10, 2014 Science (New York, N.Y.) Biller SJ, Schubotz F, Roggensack SE, Thompson AW, Summons RE, Chisholm SW From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate. Jan 08, 2014 Proceedings Of The National Academy Of Sciences Of The United States Of America Bokulich NA, Thorngate JH, Richardson PM, Mills DA Genome degeneration and adaptation in a nascent stage of symbiosis. Jan 17, 2014 Genome Biology And Evolution Oakeson KF, Gil R, Clayton AL, Dunn DM, von Niederhausern AC, Hamil C, Aoyagi A, Duval B, Baca A, Silva FJ, Vallier A, Jackson DG, Latorre A, Weiss RB, Heddi A, Moya A, Dale C In silico analysis of antibiotic resistance genes in the gut microflora of individuals from diverse geographies and age-groups. Jan 06, 2014 PloS One Ghosh TS, Gupta SS, Nair GB, Mande SS Nannochloropsis genomes reveal evolution of microalgal oleaginous traits. Jan 13, 2014 PLoS Genetics Wang D, Ning K, Li J, Hu J, Han D, Wang H, Zeng X, Jing X, Zhou Q, Su X, Chang X, Wang A, Wang W, Jia J, Wei L, Xin Y, Qiao Y, Huang R, Chen J, Han B, Yoon K, Hill RT, Zohar Y, Chen F, Hu Q, Xu J Microbial genomic taxonomy. Jan 06, 2014 BMC Genomics Thompson CC, Chimetto L, Edwards RA, Swings J, Stackebrandt E, Thompson FL Synergistic action of red and blue light and action spectra for malate formation in guard cells of Vicia faba L. Jan 10, 2014 Planta Ogawa T, Ishikawa H, Shimada K, Shibata K Acyl-homoserine lactone quorum sensing in the roseobacter clade. Jan 09, 2014 International Journal Of Molecular Sciences Zan J, Liu Y, Fuqua C, Hill RT Observation time scale, free-energy landscapes, and molecular symmetry. Jan 15, 2014 Proceedings Of The National Academy Of Sciences Of The United States Of America Wales DJ, Salamon P Massive difference in synonymous substitution rates among mitochondrial, plastid, and nuclear genes of Phaeocystis algae. Jan 17, 2014 Molecular Phylogenetics And Evolution Smith DR, Arrigo KR, Alderkamp AC, Allen AE A taxonomic signature of obesity in the microbiome? Getting to the guts of the matter. Jan 13, 2014 PloS One Finucane MM, Sharpton TJ, Laurent TJ, Pollard KS ITEP: An integrated toolkit for exploration of microbial pan-genomes. Jan 09, 2014 BMC Genomics Benedict MN, Henriksen JR, Metcalf WW, Whitaker RJ, Price ND Metagenomic and whole-genome analysis reveals new lineages of gokushoviruses and biogeographic separation in the sea. Jan 08, 2014 Frontiers In Microbiology Labonté JM, Suttle CA Comparative genomics of cultured and uncultured strains suggests genes essential for free-living growth of liberibacter. Jan 13, 2014 PloS One Fagen JR, Leonard MT, McCullough CM, Edirisinghe JN, Henry CS, Davis MJ, Triplett EW Comparative Genome Analysis of Campylobacter fetus Subspecies Revealed Horizontally Acquired Genetic Elements Important for Virulence and Niche Specificity. Jan 13, 2014 PloS One Kienesberger S, Sprenger H, Wolfgruber S, Halwachs B, Thallinger GG, Perez-Perez GI, Blaser MJ, Zechner EL, Gorkiewicz G Microbiological reduction of sb(v) in anoxic freshwater sediments. Jan 07, 2014 Environmental Science & Technology Kulp TR, Miller LG, Braiotta F, Webb SM, Kocar BD, Blum JS, Oremland RS MOPED Enables Discoveries through Consistently Processed Proteomics Data. Jan 07, 2014 Journal Of Proteome Research Higdon R, Stewart E, Stanberry L, Haynes W, Choiniere J, Montague E, Anderson N, Yandl G, Janko I, Broomall W, Fishilevich S, Lancet D, Kolker N, Kolker E [Two peaks of plastidial DNA-synthesis with different light-dependency in the cell cycle of Euglena gracilis]. Jan 17, 2014 Planta Brandt P [Regulation of the synthesis of plastid proteins in Euglena gracilis]. Jan 15, 2014 Planta Brandt P Vibrio mimicus are the reservoirs of the heat-stable enterotoxin gene (nag-st) among species of the genus Vibrio. Jan 14, 2014 World Journal Of Microbiology & Biotechnology Yuan P, Ogawa A, Ramamurthy T, Nair GB, Shimada T, Shinoda S, Takeda T