Hi. We would like to functionally annotate some metagenomic sequencing reads without doing any assembly or binning or read mapping to reference genomes. Just annotate by searching things like nr, PFAM, COGs, etc. Anyone know of tools that do this?
— Jonathan Eisen (@phylogenomics) March 29, 2023
Monday, April 03, 2023
Responses to question about functional annotation of metagenomic reads
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