Showing posts with label biomed central. Show all posts
Showing posts with label biomed central. Show all posts

Saturday, February 06, 2016

A very strange & annoying Google Scholar / Biomed Central "glitch" #GamingMetrics

So I discovered a few days ago I had dozens of new publications in 2015.  Cool right?  Here is a screengrab:



And here is another


Until I realized, well, those were published years ago.  WTF are they doing being listed as 2015?  Clearly some glitch. And then I saw a few Tweets that pointed me to figuring out what was going on.

.





So I responded


And some discussion followed





Fascinating. But I knew my papers were not published as preprints. And that they were published years before Google Scholar was not listing them as being published.

So - what happened? I think I now. These papers were all published in one journal - Standards in Genomic Sciences. The journal used to be published semi-independently by the Genomics Standards Consortium. Then they were transferred to / bout.
ht by / merged with Biomed Central and even the web address was forwarded to BMC where they host the archive of articles from before the transfer.  Then there is a new site with articles from after the transfer.

So when I click on the articles from the Google Scholar site I get to a strange thing.  The articles published before the transfer are also listed on the new site http://standardsingenomics.biomedcentral.com/.

For example - the Complete genome sequence of Sulfurospirillum deleyianum type strain (5175T) is shown here with a 2015 publication date:



Although note the Copyright 2010 little bit.  Which is interesting since this paper was in fact published in 2010.  And you can find it on the other site http://standardsingenomics.org with a 2010 publication data here.



And also in Pubmed and Pubmed Central.





So - even though Biomed Central says the new papers will be in the new site and the old papers will be ket in a separate site that is not what is happening.



For some reasons some of the older papers are now being listed in the new site with a new publication date.  And I assume because Google Scholar scrapes from the journal sites, it found the "new" papers and has now added them to it's clustering collection and has fed them into my publication list.  And despite trying I am not sure how to fix this.

I tried to "unmerge" the new publications to see if somehow the old publications showed up.  But they did not.  So .. am not sure what to do here other than to send this to BMC and Google Scholar, which I will do.  Ahh - the perils of automated systems ...

I note -  this does seem to have possibly temporarily increased my total number of citations since it seems like some of these papers are now being considered twice by Google Scholar but not sure about that.  More digging.




Friday, October 16, 2015

Beware of mimicry in #OpenAccess journals

Wow - just got this email from a new journal soliciting papers:

Dear colleagues,
we are pleased to announce that the call for papers for the Special Issue “Molecular Phylogenetics 2016” is now open with the BioMed Research International
journal.
The scope of the Special Issue covers:
•  Evolutionary genomics
•  Molecular phylogenetics and systematics
•  Molecular dating, inferring complex scenarios of coevolution, reconstruction of complex ancestral traits and events in genome evolution
•  Development and phylogeny (evo-devo)
•  Models and algorithms for molecular evolution
•  Applied phylogenetics: genotyping and barcoding of biological objects, molecular anthropology, molecular epidemiology, forensic science, etc.
•  Molecular ecology, biodiversity, and biogeography
All submissions go through the peer-review process. The journal publishes research and review articles with no page limit. It is an Open Access journal, and
fixed article processing charges apply to accepted manuscripts (www.hindawi.com/journals/bmri/apc). The journal is indexed by all major abstracting and
citation systems.
Important deadlines:
Manuscript due: 26 February 2016
First round of reviews: 20 May 2016
Publication date: 15 July 2016
Earlier manuscripts will be processed for review upon submission date. The Editors team is making all effort to provide for a fast and friendly review
process.
Detailed information on the Call-for-Papers is available online at www.hindawi.com/journals/bmri/si/295862/cfp.
Contents of the Special Issues 2013 and 2014 are available online at www.hindawi.com/journals/bmri/si/585782 and
www.hindawi.com/journals/bmri/si/392635.
We welcome all contributors interested in submitting their research.

With best regards,
the Editors team of “Molecular Phylogenetics 2016”
Whatever you think of Hindawi as a publisher (I am skeptical) the name "BioMed Research International journal." struck me as very strange.  It seems like a mimic of Biomed Central.  So I googled around and found others who also think it is a mimic (and not in a good way).  For example see Jeffrey Beale from Sept 2014: New Predatory Publisher Copies Look and Feel of BioMed Central.

Yuck.  The name appears to be a clear attempt to confuse authors that they are affiliated with Biomed Central.  And the format and look appears to be doing the same too.  So thus Hindawi has moved from my "maybe a spammy predatory publisher" to "definitely a spammy predatory publisher" list.


Friday, September 16, 2011

Can I just say I love Biomed Central #OpenAccess

Well, I have given Biomed Central a bit of snarky grief the last few days over a few things. First, I posted about to my Posterous site (but not here) a little comment about how their web site looks weird in safari:
Then I posted to this blog a little ditty about how I did not like some parts of a phylogenetic tree they use in marketing:No award to give out but here are some lessons in using Google's image search to find an image source

My main complaint was the poor treatment of microbes in the tree. In that post I discussed how I used google image search to trace the tree



 to a few sites and discovered that they recognized it was a bit of a biased tree.  And I noted they had fridge magnets that had the tree and how I wanted one.

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