Hi. We would like to functionally annotate some metagenomic sequencing reads without doing any assembly or binning or read mapping to reference genomes. Just annotate by searching things like nr, PFAM, COGs, etc. Anyone know of tools that do this?
— Jonathan Eisen (@phylogenomics) March 29, 2023
Monday, April 03, 2023
Responses to question about functional annotation of metagenomic reads
Subscribe to:
Comments (Atom)
Most recent post
A ton to be thankful for -- here is one part of that - all the acknowledgement sections from my scholarly papers
So - it is another Thanksgiving Day and in addition to thinking about family, and football, and Alice's Restaurant, I also think a lot a...
-
I have a hardback version of The Bird Way by Jennifer Ackerma n but had not gotten around to reading it alas. But now I am listening to th...
-
There is a spreading surge of PDF sharing going on in relation to a tribute to Aaron Swartz who died a few days ago. For more on Aaron ... -
Wow. Just wow. And not in a good way. Just got an email invitation to a meeting. The meeting is " THE FIRST ANNUAL WINTER Q-BIO ...
