Talmudic Question #57
32 minutes ago
Check out Eye-On-DNAs Grand Rounds
Just a little post here suggesting people check out the Medical Blog Carnival Grand Rounds at Eye on DNA here.
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PDFs of My Scientific Papers
- 113. Wu et al. 2009. Phylogeny driven genomic encyclopedia of bacteria and archaea
- 112 Eisen & MacCallum. 2009. PLoS Bio editorial on genomics of emerging infectious diseases.
- 111. Hartman et al. 2009. Ileal transplant microbiome
- 110. Yang et al. 2009. Shipworm symbiont (Teredinobacter) genome. PLoS One.
- 109. Woyke et al. 2009. Marine single cell genomics. PLoS One.
- 108. Eisen NAS Workshop 2009
- 107. Campbell et al. 2009. Nautilia profundicola genome. PLoS Genetics.
- 106. Wu et al. 2009. Thermomicrobium roseum genome. PLOS One.
- 105. Valdes et al. Acidithiobacillus genome. BMC Genomics 2008.
- 104. Coyne et al. 2008. Tetrahymena genome part II. BMC Genomics.
- 103. Podar et al. 2008. Archaeal symbiosis genomics. Genome Biology.
- 102. Wu and Eisen 2008. AMPHORA phylogenomics software. Genome Biology.
- 101. Wu et al. 2008. STAP rRNA pipeline. PLoS One.
- 100. Chatterji et al. 2008. CompostBin. RECOMB
- 99. Hazen et al. 2007. Marine plasmids. AEM.
- 98. Pfarr et al. Wolbachia naming. IJSEM.
- 97. Maresca et al. Chlorobium carotenoids. PNAS.
- 96. Norais et al. Haloferax origins of replicaiton. PLoS Genetics.
- 95. Yooseph et al. 2007. Global ocean survey protein families. PLoS Biology.
- 94. Rusch et al. 2007. Global ocean survey. PLoS Biology.
- 93. Eisen. 2007. Environmental shotgun sequencing. PLoS Biology.
- 92. Newton et al. Calyptogena supplemental informaiton
- 92. Newton et al. Calyptogena symbiont genome. Science.
- 91. Goldman et al. 2006. Myxococcus genome. PNAS.
- 90. Leebens et al. 2006. MIAMA.OMICS.
- 89 Eisen et al. 2006. Tetrahymena MAC genom. PLoS Biology.
- 88. Hamilton et al. 2006. Tetrahymena HAPPY mapping.Genomics.
- 87. Wu et al. 2006. Sharpshooter symbiont genomes. PLoS Biology.
- 86. Dunning-Hotopp et al. 2006. Anaplasma-Ehrlichia genomes. PLoS Genetics.
- 85. Penn et al. 2006. Coral symbionts. AEM.
- 84. Robb et al. Carboxytrophs.
- 83. Schmidt et al. 2005. Prochloron patellimide. PNAS.
- 82. Badger et al. 2005. Genome phylogeny of hyphomonas. IJSEM.
- 81. Desjardins et al. 2005. Virus genome commentary. Genome Biology.
- 79. Seshadri et al. 2005. Dehalococcoides genome. Science.
- 78. Moran et al. 2004. Silibacter genome. Nature.
- 77. Ward et al. 2004. Methylococcus genome. PLOS Biology.
- 76. Battista et al. 2004. Supplemental information
- 76. Battista et al. 2004. Deinococcus array. Genetics.
- 74. Venter et al. 2004 supplemental information.
- 74. Venter et al. 2004. Sargasso Sea metagenoomics. Science.
- 73. Heidelberg et al. 2004. Desulfovibrio genome. Nature Biotech.
- 72. Seshadri et al. 2004. Treponema genome. PNAS.
- 71. Wu et al 2004. Wolbachia wMel genome. PLOS Biology.
- 70. Methe et al. 2003. Geobacter genome. Science.
- 69. Shank et al. 2003. New deep sea vent sites. EOS.
- 68. Yang et al. 2003. Resistin phylogenomics. BBRC.
- 67. Nelson et al. 2003. Porphyromonas genome. J. Bact.
- 66. Miller et al 2003. Vibrio T4 phage genome J. Bact.
- 65. Eisen and Fraser 2003. Phylogenomics review. Science.
- 64. Alland et al. 2003. M_tuberculosis phylogenomic. J. Bact.
- 63. Seshadri et al. 2003. Coxiella genome. PNAS.
- 62. Read et al. 2003. B. anthracis (anthrax) genome. Nature.
- 61. Paulsen et al. 2003. Enterococcus genome. Science.
- 60. Ermolaeva et al. 2002. Arabidopsis genome duplication
- 59. Neslon et al. 2002. P_putida genome. Env. Microbiol.
- 58. Gardner et al. Plasmodium/malarial genome. Nature.
- 57. Fraser et al. 2002. Why complete genomes? J. Bact,
- 56. Heidelberg et al. 2002. Shewanella genome. Nature Biotech.
- 55. Tettelin et al. 2002. Group B Strep genome. PNAS.
- 54. Fleischmann et al. 2002. M. tuberculosis genome#2. J. Bact.
- 53. Paulsen et al. 2002. Brucella suis genome. PNAS.
- 52. Eisen and Wu 2002. Phylogenomics in action. TPB.
- 51. Eisen et al. 2002. Chlorobium genome. PNAS.
- 50. Van Houten et al. 2002. UvrC duplication commentary. PNAS.
- 49. Eisen 2002. S. pombe genome News and Views. Nature.
- 48. Ware et al. 2002. Wolbachia BAC. Int. J. Parasitol.
- 47. Beja et al. 2002. PUF operon metagenomics. Nature.
- 46. Bevan et al. 2001. Arabidopsis genome review. Plant Mol. Biol.
- 45. Salzberg and Eisen. 2001. X-files letter. Genome Biology.
- 44. DasSarma et al. 2001. Halophile photobiology.
- 43. Wood et al. 2001. Agrobacterium genome. Science.
- 42. Ward et al. 2001. Saving sequenced microbes from extinction. Nature.
- 41. Tettelin et al. 2001. Streptococcus pneumoniae genome. Science.
- 39. Salzberg et al. 2001. No bacterial to human HGT. Science.
- 38. Nierman et al. 2001. Caulobacter genome. PNAS.
- 35. Eisen. 2000. O157:H7 News and Views. Nature.
- 34. Haft et al. 2000. TIGRFams. NAR.
- 33. AGI 2000. Arabidopsis genome. Nature.
- 32. Eisen et al. 2000. X-files. Genome Biology.
- 31. Pollock et al. 2000. Evolutionary genomics. Mol. Biol. Evol.
- 30. Eisen 2000. Using genomes for lateral transfer review. Curr. Opin. Genet. Dvlp.
- 29. Eisen 2000. Using genomes for evolution review. Curr. Opin. Microbiol.
- 28. Fraser et al. Emerging diseases review. EID.
- 27. Fraser et al. 2000. Microbial genomes review. Nature.
- 26. Heidelberg et al. 2000. Vibrio cholerae genome. Nature.
- 24. Nierman et al. 2000. Microbial genomics review. Curr. Opin. Struct. Biol.
- 23. Coleman et al. 2000. HARP-SNF2 phylogeny. NAR.
- 22. Read et al. 2000. Chlamydia genomes. NAR.
- 21. Tettelin et al. 2000. Neisseria genome. Science.
- 20. Lin et al 1999. Arabidopsis chromosome II. Nature.
- 19. Eisen and Hanawalt 1999. Phylogenomics of DNA repair. Mutation Res.
- 18. White et al. 1999. Deinococcus genome. Science.
- 17. Eisen 1999. Going to extremes. Trends in Genet.
- 16. Nelson et al. 1999. Thermotoga genome. Nature.
- 15. Eisen 1998. Microsatellite mutations. Microsat. Book.
- 14. Eisen. PhD Thesis "Evolution of DNA repair gene, proteins, and processes"
- 13. Wei et al. 1998. Phylogenomics of CALL. Hum. Genet.
- 12. Eisen. 1998. MutS phylogenomics. NAR.
- 11. Gruber et al. 1998. RecA in Chlorobium and Chloroflexus. FEMS Lett.
- 10. Eisen 1998. Phylogenomics. Genome Res.
- 9. White et al. 1997. GnRH evolution. PNAS.
- 8. Eisen et al. 1997. Gastrogenomic delights. Nature Med.
- 7. Shafer et al. 1997. HIV evolution. J. Virol.
- 6. Eisen. 1997. Guide to using GDE. Methods Mol. Biol.
- 5. Eisen 1995. SNF2 evolution. NAR.
- 4. Eisen 1995. RecA vs. rRNA trees. J. Mol. Evol.
- 3. Eisen et al. 1994. Mutator transposon family. NAR.
- 2. Liu et al 1993. RecA mutations. J. Bact.
- 1. Eisen et al. 1992. Solemya symbionts. J. Bact.
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